Heirarchical clustering of protein abundances

Please select at least 2 HGNC gene symbols from the dropdown menu. These proteins are guaranteed to be in protein matrix/heatmap.

Alternatively, you may enter comma-separated HGNC gene symbols. If such symbols are not quantified in matrix then they will not be shown.

Clustering is recalculated after addition of each protein. If <2 proteins are selected, then top 100 median absolute deviated proteins (MAD) are shown.

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Normalized protein abundances across all samples

Filtered for proteins chosen above.

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Drayer SM, Ogata JD, Cronin S, Tumas J, Movahedi-Lankarani S, et al. Silva Pattern-Guided Proteomics Reveals Coordinated Tumor-Stroma Remodeling in Cervical Adenocarcinoma. Gynecologic Oncology (IN REVIEW).

Corresponding author: Dr. Nicholas Bateman (batemann@whirc.org)

Metadata for samples in Heatmap and Matrix

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Drayer SM, Ogata JD, Cronin S, Tumas J, Movahedi-Lankarani S, et al. Silva Pattern-Guided Proteomics Reveals Coordinated Tumor-Stroma Remodeling in Cervical Adenocarcinoma. Gynecologic Oncology (IN REVIEW).

Corresponding author: Dr. Nicholas Bateman (batemann@whirc.org)